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MSC's decision to take away its certification from the U.S. lobster fishery represents the second time a sustainability organization has downgraded the industry's status this year. Seafood Watch, based at Monterey Bay Aquarium in California, said in a that it has added the American and ��ɫtv lobster fisheries to its “red list” of species to avoid over concerns about risks to whales.

Some retailers removed lobster from their inventory after Seafood Watch's decision, and the industry could suffer more repercussions from MSC's move. MSC runs the largest seafood certification program in the world, and its logo, a blue and white fish, features prominently at many seafood counters.

The organization's reach is broad, as it has partnered with retailers ranging from local seafood counters to Walmart and McDonald's. MSC certifies hundreds of worldwide fisheries that make up about one-seventh of the world's wild-caught seafood. Some other major retailers, including German giant Lidl and English supermarket chain Sainsbury’s, have made commitments to give preference to MSC certified seafood.

The economic impact of the removal of certification remains to be seen, said Kyle Foley, sustainable seafood program manager for the Gulf of Maine Research Institute, a marine science center in Portland, Maine.

“Many major retailers look to certifications such as MSC to help them make sustainable seafood choices,” said Foley, who added that the removal is a suspension and not necessarily a permanent loss.

A third-party assessor that monitors fisheries' conformance with MSC standards conducted an audit of the Gulf of Maine lobster fishery in September and found the fishing industry out of compliance, MSC said in a statement. The auditor found the fishery out of compliance because of a that said the rules governing the industry don't satisfy the Endangered Species Act or the Maine Mammal Protection Act, the organization said.

“To meet the requirements of the MSC Fisheries Standard, fisheries must comply with all relevant laws,” the MSC statement said.

Right whales number about 340 and their population is falling. They are vulnerable to entanglement in fishing gear and collisions with large ships.

The whales give birth off Florida and Georgia and come north to the waters off New England and Canada to feed. Once abundant, they were decimated during the commercial whaling era generations ago. More recently, warming oceans have emerged as a threat to the species, as scientists have said that has led the the animals to stray from protected areas in search of food.

The U.S. lobster fishery is based mostly in New England and is one of the most lucrative fishing industries in the country, valued at more than $700 million at the docks in Maine alone last year. The Maine Lobstermen's Association feels the MSC decertification is the “direct result of the federal government's overreach and its misuse of science in overestimating risk from the Maine lobster fishery,” MLA Executive Director Patrice McCarron said Wednesday.

The lobster fishing group has an active lawsuit against the federal government over lobster fishing rules.

The MLA "is working to hold the federal government accountable through our lawsuit and force them to revise their plan so that it actually protects whales without leaving Maine’s historic lobster fishery in ruins and inflicting unnecessary economic harm on our state and thousands of working families," McCarron said.

The whales are also a major focus of conservation organizations. Some U.S. fisheries, including the lobster industry, “are taking place in seasonal hotspots where North Atlantic right whales are known to be found, and they are using excessive gear, which creates an unacceptable, illegal risk of entanglement,” said Gib Brogan, a fisheries campaign manager at nonprofit conservation organization Oceana.